Ask.Cyberinfrastructure

Q&A


About the Q&A category (1)
How can I run Jupyter Notebooks on my institution's HPC cluster? (6)
Is there a way to process archived files without fully extracting them to disk? (7)
Customize modulefile based on the node properties (3)
My R loop slows down when I increase the number of iterations on an HPC (2)
How can I compile my cuda code so I could call it from my R script (2)
Is there an appreciable difference between a single thread waiting for work and multiple threads that are created and destroyed on demand? (2)
How can I use passwordless ssh in an HPC environment? (4)
How do I estimate if the hard time limit will be exceeded before submitting a job? (2)
Running multiple LAMMPS jobs on a node (2)
Using GPFS and CephFS together (1)
Poor interaction with MATLAB running on remote server (3)
Using LMOD to load Python3 libraries from a user's home directory (4)
How to reduce memory footprint without restructuring mpi code (3)
How do I search for which modules are available on an HPC? (6)
Tensorflow script to run on single core (3)
PacBIO SmrtAnalysis (6)
What is a Science DMZ? (2)
How do I redirect stdout/stderr in my SLURM job scripts? (2)
How can one determine the amount of RAM a node has in an HPC environment? (5)
In a PBS Pro select statement, what's the difference between procs and mpiprocs? (2)
Starting a virtual machine image without knowing the user name or password (3)
What kind of hardware works best for the Amber Molecular Dynamics Package? (4)
What is a "Burst Buffer"? (2)
How do I use DMTCP to create a checkpoint and restart my program? (1)
What are the relative benefits of a stateful vs. stateless cluster configuration? (4)
Cgroups with MPI process affinity (2)
How can I use SLURM's sacct command to show memory usage statistics for a job that I am running? (6)
How do I install Python 2.7 on my Comet allocation and where can I store data long term? (3)
Which R package is more efficient to use for parallelization? (4)