Ask.Cyberinfrastructure

Q&A


Topic Replies Activity
How can i install git LFS on a shared campus cluster running SL7? 3 May 3, 2019
Can the ArcGIS application run in an HPC cluster environment? 2 February 11, 2019
What kind of hardware works best for the Amber Molecular Dynamics Package? 4 September 19, 2018
With MPI jobs using an Isilon Storage system for scratch, are there I/o issues that can be avoided? 3 February 1, 2019
How do I use a Globus file transfer service? 3 November 29, 2018
How do I get the list of features and resources of each node in Slurm? 3 November 17, 2018
InCommon Federation for HPC Clusters 3 November 19, 2018
What is the Tool for Analysis of Surface Cracks (TASC) from NASA? 2 May 22, 2019
Starting a virtual machine image without knowing the user name or password 3 August 29, 2018
What is a "tarpipe" and how do I use it? 2 July 11, 2018
How do I check that all mount points are in place, and mark a node out of service if a mount point is missing before a job is scheduled in Slurm? 3 July 22, 2018
Why is casting a double to an integer so slow? 5 July 24, 2018
How can I restart my GAMESS calculation and resubmit? 2 July 24, 2018
How do I install Python 2.7 on my Comet allocation and where can I store data long term? 3 November 16, 2018
How can I see the names of the nodes my multi-node MPI job is using on our SGE cluster? 3 September 10, 2018
"slurmstepd: error: Exceeded step memory limit at some point" 3 July 16, 2018
How do you add your institutional HPC cluster to the Open Science Grid (OSG)? 2 July 31, 2018
How can I determine how much memory I need before submitting my GAMESS calculation? 2 July 24, 2018
How many MPI ranks should I request for a GAMESS calculation? 2 July 24, 2018
What are the relative benefits of a stateful vs. stateless cluster configuration? 4 October 26, 2018
How can I use SLURM's sacct command to show memory usage statistics for a job that I am running? 6 March 30, 2018
How I can improve the performance of my job that needs to perform many I/O operations with a very large text file 2 May 31, 2018
What are some ways to organize the modules created to manage multiple versions and combinations of compilers, tools, drivers and libraries on a shared cluster? 3 June 22, 2018
What is a "Burst Buffer"? 2 March 21, 2018
What are good ways to allow the use of software containers in a shared HPC cluster? 3 July 28, 2018
In a PBS Pro select statement, what's the difference between procs and mpiprocs? 2 June 29, 2018
Why was Rocks software named "Rocks"? 3 July 24, 2018
Cgroups with MPI process affinity 2 August 2, 2018
Which R package is more efficient to use for parallelization? 4 June 12, 2018
How to attach to a running job to run top on compute node 3 May 23, 2019